Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs73031649 chr11:123522605 G/C 0.00013 288 25.57 29.38 2.07 KM Plot
KIRP rs73044256 chr12:6625285 C/T 0 276 23.63 26.63 3.9 KM Plot
KIRP rs73058839 chr1:187792465 A/C 0.000144 286 26.28 21.82 11.18 KM Plot
KIRP rs73103683 chr7:52339188 C/T 0.000114 285 26.77 19.9 19.9 KM Plot
KIRP rs73105954 chr20:29943706 C/T 0.000182 285 24.73 30.92 12.1 KM Plot
KIRP rs73167044 chr22:40842405 T/C 8.58E-5 287 26.4 22.37 12.1 KM Plot
KIRP rs73167045 chr22:40842923 T/C 8.51E-5 287 26.4 22.8 12.1 KM Plot
KIRP rs73183490 chr3:183841760 G/C 7.27E-5 280 25.5 28.78 17 KM Plot
KIRP rs73184519 chr8:1124645 C/T 2.49E-5 281 25.37 28.97 15.97 KM Plot
KIRP rs73188892 chr13:46939393 G/A 4.73E-7 289 24.73 34.38 23.23 KM Plot
KIRP rs73188894 chr13:46941091 A/C 4.73E-7 289 24.73 34.38 23.23 KM Plot
KIRP rs73188896 chr13:46941893 G/T 4.73E-7 289 24.73 34.38 23.23 KM Plot
KIRP rs73188897 chr13:46942588 C/T 4.73E-7 289 24.73 34.38 23.23 KM Plot
KIRP rs73190915 chr13:46964787 T/C 4.91E-7 289 24.8 37.87 23.23 KM Plot
KIRP rs73190918 chr13:46970088 A/G 4.91E-7 289 24.8 37.87 23.23 KM Plot